| 1. Round | 13/07/2013 | FC Koper | - | NK Krka | 2:1 | ||||
| 2. Round | 20/07/2013 | NK Krka | - | ND Gorica | 1:1 |  |
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| 3. Round | 28/07/2013 | Olimpija Ljubljana | - | NK Krka | 5:0 | ||||
| 4. Round | 03/08/2013 | NK Krka | - | NK Domžale | 3:0 | ||||
| 5. Round | 10/08/2013 | NK Maribor | - | NK Krka | 3:0 | ||||
| 6. Round | 17/08/2013 | NK Krka | - | NK Zavrč | 3:4 | ||||
| 14. Round | 19/10/2013 | NK Krka | - | NK Maribor | 0:5 | ||||
| 15. Round | 25/10/2013 | NK Zavrč | - | NK Krka | 3:0 | ||||
| 16. Round | 02/11/2013 | NK Krka | - | NK Celje | 0:1 | ||||
| 17. Round | 12/11/2013 | Rudar Velenje | - | NK Krka | 0:1 |
Slovenia