| 25. Round | 12/03/2016 | FK Torpedo Armavir | - | FK Tom Tomsk | 1:1 | ||||
| 26. Round | 16/03/2016 | Sibir Novosibirsk | - | FK Torpedo Armavir | 2:2 | ||||
| 27. Round | 20/03/2016 | FK Torpedo Armavir | - | Gazovik Orenburg | 3:0 |  |
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| 28. Round | 27/03/2016 | Baltika Kaliningrad | - | FK Torpedo Armavir | 0:1 | ||||
| 29. Round | 03/04/2016 | FK Torpedo Armavir | - | Shinnik Yaroslavl | 0:2 | ||||
| 30. Round | 07/04/2016 | FK Kamaz | - | FK Torpedo Armavir | 1:1 | ||||
| 31. Round | 11/04/2016 | FK Torpedo Armavir | - | Volgar Astrakhan | 1:0 | ||||
| 32. Round | 18/04/2016 | Spartak Moskva 2 | - | FK Torpedo Armavir | 1:0 | ||||
| 33. Round | 25/04/2016 | FK Torpedo Armavir | - | Enisey Krasnoyarsk | 2:3 | |
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| 34. Round | 02/05/2016 | Fakel Voronezh | - | FK Torpedo Armavir | 2:0 | ||||
| 35. Round | 06/05/2016 | FK Torpedo Armavir | - | FK Tyumen | 2:1 | ||||
| 36. Round | 10/05/2016 | FK Radian-Baikal Irkutsk | - | FK Torpedo Armavir | 1:2 | |
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| 37. Round | 15/05/2016 | FK Torpedo Armavir | - | Luch-Energiya Vladivostok | 2:0 | |
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| 38. Round | 21/05/2016 | FK Torpedo Armavir | - | Zenit St. Petersburg 2 | 2:0 |
Russia