| 3. Round | 16/09/2012 | AEK Athen | - | Aris Saloniki | 1:1 | ||||
| 4. Round | 23/09/2012 | OFI Heraklion | - | AEK Athen | 2:1 | ||||
| 5. Round | 29/09/2012 | Panionios GSS | - | AEK Athen | 1:0 |  |
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| 6. Round | 06/10/2012 | AEK Athen | - | AO Kerkyra | 1:1 | ||||
| 9. Round | 04/11/2012 | Panathinaikos | - | AEK Athen | 1:0 | ||||
| 13. Round | 03/12/2012 | AEK Athen | - | PAS Giannina | 2:1 | ||||
| 16. Round | 05/01/2013 | Asteras Tripolis | - | AEK Athen | 3:1 | ||||
| 17. Round | 12/01/2013 | AEK Athen | - | Skoda Xanthi | 1:0 | ||||
| 18. Round | 20/01/2013 | Aris Saloniki | - | AEK Athen | 1:1 | ||||
| 19. Round | 26/01/2013 | AEK Athen | - | OFI Heraklion | 2:1 | ||||
| 25. Round | 10/03/2013 | Olympiakos Piraeus | - | AEK Athen | 3:0 | ||||
| 26. Round | 16/03/2013 | AEK Athen | - | Veria FC | 2:1 | ||||
| 27. Round | 31/03/2013 | Levadiakos | - | AEK Athen | 0:0 | ||||
| 28. Round | 08/04/2013 | PAS Giannina | - | AEK Athen | 2:0 | ||||
| 29. Round | 13/04/2013 | AEK Athen | - | Panthrakikos | 0:3 dec. | ||||
| 30. Round | 21/04/2013 | Atromitos | - | AEK Athen | 1:0 |
France