| 1. Round | 01/11/2016 | Anagennisi Karditsa | - | Aris Saloniki | 1:1 | ||||
| 2. Round | 06/11/2016 | Aris Saloniki | - | Aiginiakos FC | 1:1 | ||||
| 3. Round | 26/11/2016 | Kissamikos | - | Aris Saloniki | 0:1 |  |
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| 4. Round | 05/12/2016 | Aris Saloniki | - | AEL Kalloni | 5:0 | ||||
| 5. Round | 10/12/2016 | Panelefsiniakos Elefsinas | - | Aris Saloniki | 1:3 | ||||
| 6. Round | 18/12/2016 | Aris Saloniki | - | AO Trikala | 3:2 | ||||
| 7. Round | 22/12/2016 | Aris Saloniki | - | AO Chania | 2:1 | ||||
| 8. Round | 03/01/2017 | GS Kallithea | - | Aris Saloniki | 2:0 | |
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| 9. Round | 08/01/2017 | Aris Saloniki | - | Panegialios FC | 2:1 | ||||
| 11. Round | 18/01/2017 | Aris Saloniki | - | Panserraikos | 4:0 |  |
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| 12. Round | 21/01/2017 | Acharnaikos FC | - | Aris Saloniki | 1:2 | ||||
| 13. Round | 28/01/2017 | Aris Saloniki | - | OFI Heraklion | 1:0 | ||||
| 14. Round | 05/02/2017 | Lamia | - | Aris Saloniki | 1:0 | ||||
| 15. Round | 12/02/2017 | Apollon Smyrnis | - | Aris Saloniki | 2:2 | ||||
| 20. Round | 12/03/2017 | Aris Saloniki | - | Kissamikos | 1:0 |
Greece