| 5. Round | 25/09/1998 | OFI Heraklion | - | AEK Athen | 0:1 | ||||
| 6. Round | 03/10/1998 | AEK Athen | - | Paniliakos Pyrgos | 3:1 | ||||
| 18. Round | 07/02/1999 | AEK Athen | - | Panionios GSS | 3:0 | ||||
| 19. Round | 13/02/1999 | Apollon Smyrnis | - | AEK Athen | 1:1 | ||||
| 20. Round | 20/02/1999 | AEK Athen | - | Panelefsiniakos Elefsinas | 6:2 | ||||
| 31. Round | 15/05/1999 | AEK Athen | - | Ethnikos Piraeus | 2:0 |
Greece