| 8. Round | 29/10/2012 | OFI Heraklion | - | Panathinaikos | 2:2 |  |
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| 9. Round | 04/11/2012 | Panathinaikos | - | AEK Athen | 1:0 | |
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| 12. Round | 25/11/2012 | Platanias Chanion | - | Panathinaikos | 2:1 | ||||
| 13. Round | 02/12/2012 | Panionios GSS | - | Panathinaikos | 1:2 | ||||
| 15. Round | 16/12/2012 | Veria FC | - | Panathinaikos | 3:0 | ||||
| 28. Round | 07/04/2013 | Panathinaikos | - | Panionios GSS | 0:0 | ||||
| 29. Round | 14/04/2013 | Olympiakos Piraeus | - | Panathinaikos | 1:1 | ||||
| 30. Round | 21/04/2013 | Panathinaikos | - | Veria FC | 3:2 |
Greece