| 13. Round | 04/10/2020 | FK Krasnodar 2 | - | FK Nizhny Novgorod | 2:3 | ||||
| 14. Round | 09/10/2020 | FK Chertanovo | - | FK Krasnodar 2 | 1:0 | ||||
| 15. Round | 13/10/2020 | FK Krasnodar 2 | - | FK Tom Tomsk | 2:0 | ||||
| 18. Round | 28/10/2020 | FK Neftekhimik | - | FK Krasnodar 2 | 5:0 | ||||
| 27. Round | 27/02/2021 | Baltika Kaliningrad | - | FK Krasnodar 2 | 2:0 |  |
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| 28. Round | 06/03/2021 | FK Krasnodar 2 | - | Veles Moskva | 2:1 | ||||
| 29. Round | 10/03/2021 | SKA-Khabarovsk | - | FK Krasnodar 2 | 0:0 | ||||
| 30. Round | 14/03/2021 | FK Krasnodar 2 | - | FK Chayka | 1:1 | ||||
| 31. Round | 20/03/2021 | FK Orenburg | - | FK Krasnodar 2 | 1:0 | ||||
| 33. Round | 28/03/2021 | FK Nizhny Novgorod | - | FK Krasnodar 2 | 3:0 | |
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| 35. Round | 07/04/2021 | FK Tom Tomsk | - | FK Krasnodar 2 | 1:1 | |
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| 36. Round | 11/04/2021 | FK Krasnodar 2 | - | Irtysh Omsk | 2:0 | ||||
| 37. Round | 17/04/2021 | Dinamo Bryansk | - | FK Krasnodar 2 | 2:1 | ||||
| 38. Round | 24/04/2021 | FK Krasnodar 2 | - | FK Neftekhimik | 1:1 |  |
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| 40. Round | 02/05/2021 | FK Krasnodar 2 | - | Tekstilshchik Ivanovo | 0:1 | |
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| 42. Round | 15/05/2021 | FK Krasnodar 2 | - | Volgar Astrakhan | 1:0 |
Russia