| 6. Round | 21/08/2016 | Deportivo Guadalajara | - | Atlas Guadalajara | 2:2 |  |
|||
| 7. Round | 28/08/2016 | Atlas Guadalajara | - | Cruz Azul | 1:1 | ||||
| 8. Round | 11/09/2016 | Club León | - | Atlas Guadalajara | 4:1 | ||||
| 9. Round | 18/09/2016 | Atlas Guadalajara | - | Club Necaxa | 0:0 | |
|||
| 14. Round | 24/10/2016 | Santos Laguna | - | Atlas Guadalajara | 2:2 |  |
|||
| 15. Round | 30/10/2016 | CF Pachuca | - | Atlas Guadalajara | 3:2 | ||||
| 16. Round | 06/11/2016 | Atlas Guadalajara | - | CF América | 1:1 | |
|||
| 17. Round | 19/11/2016 | Chiapas FC | - | Atlas Guadalajara | 1:0 |
Mexico