| 1. Round | 12/03/2016 | FK Astana | - | Shakter Karaganda | 2:1 | ||||
| 2. Round | 20/03/2016 | Shakter Karaganda | - | Zhetysu Taldykorgan | 0:0 | ||||
| 4. Round | 09/04/2016 | Shakter Karaganda | - | Irtysh Pavlodar | 0:2 | ||||
| 5. Round | 13/04/2016 | FK Kairat | - | Shakter Karaganda | 0:0 | ||||
| 6. Round | 17/04/2016 | Shakter Karaganda | - | FK Okzhetpes | 0:1 | ||||
| 7. Round | 23/04/2016 | FK Akzhayik | - | Shakter Karaganda | 0:1 | ||||
| 8. Round | 01/05/2016 | Shakter Karaganda | - | FK Atyrau | 0:0 | ||||
| 9. Round | 05/05/2016 | FK Taraz | - | Shakter Karaganda | 1:2 | ||||
| 10. Round | 09/05/2016 | FK Ordabasy | - | Shakter Karaganda | 2:0 |  |
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| 11. Round | 14/05/2016 | Shakter Karaganda | - | FK Aktobe | 0:2 | ||||
| 12. Round | 21/05/2016 | Zhetysu Taldykorgan | - | Shakter Karaganda | 2:0 | ||||
| 13. Round | 29/05/2016 | Shakter Karaganda | - | Tobyl Kostanay | 1:0 | ||||
| 14. Round | 02/06/2016 | Irtysh Pavlodar | - | Shakter Karaganda | 0:0 | ||||
| 15. Round | 11/06/2016 | Shakter Karaganda | - | FK Kairat | 0:5 | |
Kosovo
Finland