| 2. Round | 31/08/2003 | Skoda Xanthi | - | Panionios GSS | 0:0 | ||||
| 3. Round | 14/09/2003 | Atromitos | - | Skoda Xanthi | 2:0 |  |
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| 4. Round | 20/09/2003 | Aris Saloniki | - | Skoda Xanthi | 3:2 | ||||
| 5. Round | 27/09/2003 | Skoda Xanthi | - | Olympiakos Piraeus | 1:3 | ||||
| 6. Round | 04/10/2003 | PAOK Saloniki | - | Skoda Xanthi | 1:1 | ||||
| 7. Round | 18/10/2003 | Skoda Xanthi | - | Akratitos Liosion | 2:0 |  |
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| 8. Round | 26/10/2003 | AO Proodeftiki | - | Skoda Xanthi | 1:1 | |
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| 9. Round | 02/11/2003 | Skoda Xanthi | - | Paniliakos Pyrgos | 2:1 | |
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| 10. Round | 09/11/2003 | Skoda Xanthi | - | AO Egaleo | 1:2 | ||||
| 11. Round | 23/11/2003 | OFI Heraklion | - | Skoda Xanthi | 1:2 | ||||
| 12. Round | 30/11/2003 | Skoda Xanthi | - | GS Kallithea | 1:1 | ||||
| 13. Round | 07/12/2003 | AEK Athen | - | Skoda Xanthi | 3:0 | |
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| 15. Round | 21/12/2003 | Iraklis Saloniki | - | Skoda Xanthi | 3:0 | ||||
| 16. Round | 11/01/2004 | Skoda Xanthi | - | Panathinaikos | 0:1 | ||||
| 17. Round | 18/01/2004 | Panionios GSS | - | Skoda Xanthi | 1:0 | ||||
| 18. Round | 25/01/2004 | Skoda Xanthi | - | Atromitos | 2:1 | ||||
| 23. Round | 14/03/2004 | Skoda Xanthi | - | AO Proodeftiki | 2:2 | |
Chile