| 4. Round | 30/03/2025 | FCI Levadia | - | JK Nõmme Kalju | 2:1 | ||||
| 6. Round | 08/04/2025 | FCI Levadia | - | FC Kuressaare | 2:1 | ||||
| 8. Round | 19/04/2025 | JK Tallinna Kalev | - | FCI Levadia | 0:9 | ||||
| 10. Round | 26/04/2025 | FCI Levadia | - | JK Tammeka | 4:0 | ||||
| 11. Round | 04/05/2025 | JK Nõmme Kalju | - | FCI Levadia | 2:0 | ||||
| 12. Round | 11/05/2025 | FCI Levadia | - | Paide Linnameeskond | 2:1 | ||||
| 15. Round | 31/05/2025 | Harju JK | - | FCI Levadia | 0:1 |  |
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| 16. Round | 14/06/2025 | FC Kuressaare | - | FCI Levadia | 1:2 | |
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| 17. Round | 18/06/2025 | FCI Levadia | - | JK Tallinna Kalev | 4:0 | ||||
| 20. Round | 21/06/2025 | FCI Levadia | - | JK Nõmme Kalju | 3:1 | |
Estonia