| 8. Round | 29/10/2006 | Iraklis Saloniki | - | Panathinaikos | 0:1 | ||||
| 10. Round | 12/11/2006 | Ergotelis | - | Panathinaikos | 0:1 | ||||
| 12. Round | 26/11/2006 | Panathinaikos | - | Apollon Kalamarias | 3:2 | ||||
| 23. Round | 25/02/2007 | Panathinaikos | - | Iraklis Saloniki | 3:0 | ||||
| 28. Round | 22/04/2007 | Panathinaikos | - | Aris Saloniki | 0:1 | ||||
| 29. Round | 29/04/2007 | AE Lárissa | - | Panathinaikos | 1:1 |  |
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| 30. Round | 13/05/2007 | Panathinaikos | - | AO Kerkyra | 2:2 |
Germany