| 11. Round | 21/09/2024 | Enisey Krasnoyarsk | - | SKA-Khabarovsk | 2:2 | ||||
| 12. Round | 29/09/2024 | SKA-Khabarovsk | - | FK Tyumen | 2:1 | ||||
| 13. Round | 05/10/2024 | FK Ufa | - | SKA-Khabarovsk | 3:3 | ||||
| 16. Round | 26/10/2024 | SKA-Khabarovsk | - | Chernomorets Novorossisk | 6:1 |  |
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| 22. Round | 02/03/2025 | FK Neftekhimik | - | SKA-Khabarovsk | 0:1 | ||||
| 23. Round | 09/03/2025 | Shinnik Yaroslavl | - | SKA-Khabarovsk | 0:1 | ||||
| 24. Round | 16/03/2025 | SKA-Khabarovsk | - | FK Sochi | 0:1 | ||||
| 25. Round | 23/03/2025 | SKA-Khabarovsk | - | Rotor Volgograd | 1:0 | ||||
| 26. Round | 29/03/2025 | FK Tyumen | - | SKA-Khabarovsk | 0:1 | ||||
| 27. Round | 06/04/2025 | SKA-Khabarovsk | - | Baltika Kaliningrad | 1:2 | ||||
| 28. Round | 13/04/2025 | SKA-Khabarovsk | - | Arsenal Tula | 1:0 | ||||
| 29. Round | 19/04/2025 | Chernomorets Novorossisk | - | SKA-Khabarovsk | 2:1 | ||||
| 30. Round | 26/04/2025 | SKA-Khabarovsk | - | Enisey Krasnoyarsk | 1:2 | ||||
| 31. Round | 03/05/2025 | SKA-Khabarovsk | - | FK Kamaz | 2:1 | ||||
| 32. Round | 11/05/2025 | Alania Vladikavkaz | - | SKA-Khabarovsk | 0:4 | ||||
| 33. Round | 17/05/2025 | SKA-Khabarovsk | - | Rodina Moskva | 1:0 | ||||
| 34. Round | 24/05/2025 | FK Ural | - | SKA-Khabarovsk | 3:1 |
Belarus