| 3. Round | 20/01/2013 | UANL Tigres | - | Atlas Guadalajara | 1:0 | ||||
| 4. Round | 27/01/2013 | Atlas Guadalajara | - | CF América | 2:1 | ||||
| 5. Round | 02/02/2013 | Jaguares Chiapas | - | Atlas Guadalajara | 1:2 |  |
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| 6. Round | 10/02/2013 | Atlas Guadalajara | - | Atlante | 2:1 | ||||
| 7. Round | 17/02/2013 | Atlas Guadalajara | - | CF Monterrey | 2:1 | ||||
| 8. Round | 23/02/2013 | Gallos Blancos (old) | - | Atlas Guadalajara | 0:0 | ||||
| 15. Round | 21/04/2013 | Atlas Guadalajara | - | Deportivo Guadalajara | 1:0 | ||||
| 17. Round | 05/05/2013 | Atlas Guadalajara | - | Club León | 0:1 |
Mexico