1. Round | 17/01/2009 | Jaguares Chiapas | - | Atlas Guadalajara | 2:1 | ||||
5. Round | 15/02/2009 | Atlas Guadalajara | - | Atlante | 1:0 | ||||
6. Round | 19/02/2009 | CF América | - | Atlas Guadalajara | 2:2 | ||||
7. Round | 22/02/2009 | Atlas Guadalajara | - | Pumas UNAM | 2:0 | ||||
8. Round | 01/03/2009 | Puebla FC | - | Atlas Guadalajara | 1:1 | ||||
9. Round | 08/03/2009 | Atlas Guadalajara | - | Indios Juárez | 3:1 | ||||
10. Round | 15/03/2009 | Deportivo Guadalajara | - | Atlas Guadalajara | 0:1 | ||||
11. Round | 22/03/2009 | Atlas Guadalajara | - | UAG Tecos | 0:0 | ||||
12. Round | 05/04/2009 | CF Monterrey | - | Atlas Guadalajara | 2:2 | ||||
13. Round | 12/04/2009 | Atlas Guadalajara | - | Club Necaxa | 4:1 | ||||
14. Round | 19/04/2009 | Santos Laguna | - | Atlas Guadalajara | 4:1 | ||||
15. Round | 26/04/2009 | Atlas Guadalajara | - | Deportivo Toluca | 0:0 | ||||
17. Round | 10/05/2009 | Atlas Guadalajara | - | CF Pachuca | 0:5 |