| 3. Round | 20/08/2011 | FC Ingolstadt 04 II | - | SC Freiburg II | 2:1 | ||||
| 4. Round | 26/08/2011 | SC Freiburg II | - | Stuttgarter Kickers | 2:5 | ||||
| 5. Round | 31/08/2011 | 1. FC Nürnberg II | - | SC Freiburg II | 2:1 | ||||
| 6. Round | 07/09/2011 | SC Freiburg II | - | Bayern München II | 2:1 |  |
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| 7. Round | 11/09/2011 | Karlsruher SC II | - | SC Freiburg II | 2:1 | |
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| 8. Round | 17/09/2011 | SC Freiburg II | - | Waldhof Mannheim | 3:0 | |
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| 9. Round | 25/09/2011 | SG Sonnenhof Großaspach | - | SC Freiburg II | 3:1 | ||||
| 10. Round | 02/10/2011 | SC Freiburg II | - | FC Memmingen | 1:2 | ||||
| 13. Round | 15/10/2011 | SC Freiburg II | - | Eintracht Frankfurt II | 2:1 | ||||
| 14. Round | 22/10/2011 | SpVgg Greuther Fürth II | - | SC Freiburg II | 1:2 | ||||
| 15. Round | 29/10/2011 | SC Freiburg II | - | TSV 1860 München II | 1:0 | ||||
| 16. Round | 06/11/2011 | 1899 Hoffenheim II | - | SC Freiburg II | 1:3 | |
France