| 10. Round | 24/09/2011 | Preston North End | - | Tranmere Rovers | 2:1 |  |
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| 11. Round | 01/10/2011 | Tranmere Rovers | - | AFC Bournemouth | 0:0 | ||||
| 12. Round | 08/10/2011 | Charlton Athletic | - | Tranmere Rovers | 1:1 | ||||
| 13. Round | 15/10/2011 | Tranmere Rovers | - | Oldham Athletic | 1:0 | |
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| 14. Round | 22/10/2011 | Tranmere Rovers | - | Walsall FC | 2:1 | ||||
| 15. Round | 25/10/2011 | Hartlepool United | - | Tranmere Rovers | 0:2 | ||||
| 16. Round | 29/10/2011 | Scunthorpe United | - | Tranmere Rovers | 4:2 |  |
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| 18. Round | 19/11/2011 | Tranmere Rovers | - | Sheffield Wednesday | 1:2 | |
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| 19. Round | 26/11/2011 | Exeter City | - | Tranmere Rovers | 3:0 | ||||
| 20. Round | 10/12/2011 | Tranmere Rovers | - | Milton Keynes Dons | 0:2 | ||||
| 21. Round | 17/12/2011 | Stevenage FC | - | Tranmere Rovers | 2:1 | ||||
| 23. Round | 30/12/2011 | Tranmere Rovers | - | Bury FC | 2:0 | ||||
| 24. Round | 02/01/2012 | Sheffield Wednesday | - | Tranmere Rovers | 2:1 | ||||
| 25. Round | 07/01/2012 | Tranmere Rovers | - | Brentford FC | 2:2 |
England