| 2. Round | 20/07/2013 | FK Dukla Banská Bystrica | - | MFK Košice | 1:0 | ||||
| 3. Round | 27/07/2013 | MFK Košice | - | FC Nitra | 4:2 | ||||
| 5. Round | 11/08/2013 | MFK Košice | - | Slovan Bratislava | 0:1 | ||||
| 6. Round | 17/08/2013 | FK Senica | - | MFK Košice | 1:0 | ||||
| 9. Round | 14/09/2013 | MFK Košice | - | FC DAC 1904 | 4:1 | ||||
| 15. Round | 26/10/2013 | MFK Košice | - | Spartak Trnava | 1:3 | ||||
| 17. Round | 09/11/2013 | MFK Košice | - | FK Senica | 3:1 | ||||
| 19. Round | 30/11/2013 | MFK Košice | - | Spartak Myjava | 2:1 | ||||
| 21. Round | 08/03/2014 | MFK Ružomberok | - | MFK Košice | 0:3 | ||||
| 25. Round | 05/04/2014 | MFK Košice | - | FC Nitra | 1:0 | ||||
| 26. Round | 12/04/2014 | Spartak Trnava | - | MFK Košice | 1:0 | ||||
| 30. Round | 10/05/2014 | Spartak Myjava | - | MFK Košice | 0:1 | ||||
| 31. Round | 17/05/2014 | MFK Košice | - | FC DAC 1904 | 2:1 | ||||
| 32. Round | 20/05/2014 | MFK Košice | - | MFK Ružomberok | 1:2 |  |
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| 33. Round | 31/05/2014 | MŠK Žilina | - | MFK Košice | 3:2 |
Slovakia