| 2. Round | 30/08/2003 | Atromitos | - | Paniliakos Pyrgos | 1:3 | ||||
| 3. Round | 14/09/2003 | Paniliakos Pyrgos | - | Aris Saloniki | 0:0 | ||||
| 4. Round | 21/09/2003 | Olympiakos Piraeus | - | Paniliakos Pyrgos | 1:0 | ||||
| 5. Round | 28/09/2003 | Paniliakos Pyrgos | - | PAOK Saloniki | 1:4 | ||||
| 6. Round | 05/10/2003 | Akratitos Liosion | - | Paniliakos Pyrgos | 2:2 | ||||
| 9. Round | 02/11/2003 | Skoda Xanthi | - | Paniliakos Pyrgos | 2:1 | ||||
| 10. Round | 09/11/2003 | Paniliakos Pyrgos | - | OFI Heraklion | 1:1 |  |
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| 11. Round | 23/11/2003 | GS Kallithea | - | Paniliakos Pyrgos | 2:2 | ||||
| 13. Round | 07/12/2003 | Ionikos Nikea | - | Paniliakos Pyrgos | 4:2 | ||||
| 14. Round | 14/12/2003 | Paniliakos Pyrgos | - | Iraklis Saloniki | 1:2 | ||||
| 21. Round | 22/02/2004 | Paniliakos Pyrgos | - | Akratitos Liosion | 0:3 | ||||
| 22. Round | 29/02/2004 | AO Proodeftiki | - | Paniliakos Pyrgos | 2:0 | ||||
| 23. Round | 13/03/2004 | AO Egaleo | - | Paniliakos Pyrgos | 4:1 | ||||
| 25. Round | 04/04/2004 | OFI Heraklion | - | Paniliakos Pyrgos | 0:0 | ||||
| 28. Round | 02/05/2004 | Paniliakos Pyrgos | - | Ionikos Nikea | 2:2 | ||||
| 30. Round | 22/05/2004 | Paniliakos Pyrgos | - | Panathinaikos | 0:1 | |
Greece