| 1. Round | 27/07/2008 | NK Croatia Sesvete | - | NK Osijek | 1:1 | ||||
| 3. Round | 09/08/2008 | NK Croatia Sesvete | - | Dinamo Zagreb | 0:1 | ||||
| 4. Round | 17/08/2008 | NK Inter Zaprešić | - | NK Croatia Sesvete | 3:2 | ||||
| 7. Round | 14/09/2008 | NK Zadar | - | NK Croatia Sesvete | 1:2 | ||||
| 8. Round | 21/09/2008 | NK Croatia Sesvete | - | NK Varteks | 4:0 |  |
|||
| 9. Round | 28/09/2008 | NK Zagreb | - | NK Croatia Sesvete | 1:1 | ||||
| 10. Round | 05/10/2008 | NK Croatia Sesvete | - | Hajduk Split | 1:0 | ||||
| 11. Round | 19/10/2008 | Slaven Belupo | - | NK Croatia Sesvete | 4:0 |  |
|||
| 12. Round | 26/10/2008 | NK Osijek | - | NK Croatia Sesvete | 4:2 | ||||
| 13. Round | 02/11/2008 | NK Croatia Sesvete | - | HNK Šibenik | 0:0 | ||||
| 14. Round | 09/11/2008 | Dinamo Zagreb | - | NK Croatia Sesvete | 6:1 | ||||
| 15. Round | 16/11/2008 | NK Croatia Sesvete | - | NK Inter Zaprešić | 1:3 | ||||
| 16. Round | 23/11/2008 | HNK Rijeka | - | NK Croatia Sesvete | 2:1 | ||||
| 18. Round | 07/12/2008 | NK Croatia Sesvete | - | NK Zadar | 3:1 | ||||
| 19. Round | 22/02/2009 | NK Varteks | - | NK Croatia Sesvete | 2:1 |
Bosnia-Herzegovina