| 2. Round | 29/07/2012 | Club San José | - | Nacional Potosí | 2:0 | ||||
| 4. Round | 05/08/2012 | Club San José | - | Club Aurora | 4:0 | ||||
| 5. Round | 09/08/2012 | Petrolero de Yacuiba | - | Club San José | 2:0 | ||||
| 6. Round | 19/08/2012 | Club San José | - | Blooming | 4:0 | ||||
| 7. Round | 26/08/2012 | Real Potosí | - | Club San José | 4:1 | ||||
| 9. Round | 16/09/2012 | Jorge Wilstermann | - | Club San José | 1:2 |  |
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| 1. Round | 20/09/2012 | Oriente Petrolero | - | Club San José | 0:0 | ||||
| 11. Round | 29/09/2012 | Club San José | - | Petrolero de Yacuiba | 4:3 | ||||
| 12. Round | 20/10/2012 | La Paz FC | - | Club San José | 2:2 | ||||
| 14. Round | 04/11/2012 | Nacional Potosí | - | Club San José | 0:2 | ||||
| 16. Round | 11/11/2012 | Club Aurora | - | Club San José | 0:2 | |
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| 18. Round | 25/11/2012 | Club San José | - | Real Potosí | 1:1 | ||||
| 19. Round | 30/11/2012 | Bolívar | - | Club San José | 2:4 |
Bolivia