| 4. Round | 30/03/2024 | JK Narva Trans | - | Nõmme United | 2:0 |  |
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| 6. Round | 13/04/2024 | JK Narva Trans | - | JK Tallinna Kalev | 2:2 | |
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| 7. Round | 21/04/2024 | FC Kuressaare | - | JK Narva Trans | 5:0 | ||||
| 8. Round | 28/04/2024 | JK Narva Trans | - | Paide Linnameeskond | 1:1 | ||||
| 9. Round | 04/05/2024 | JK Narva Trans | - | Pärnu JK Vaprus | 0:0 | ||||
| 11. Round | 18/05/2024 | JK Narva Trans | - | FC Flora | 1:3 | ||||
| 12. Round | 23/05/2024 | Nõmme United | - | JK Narva Trans | 1:3 | ||||
| 13. Round | 27/05/2024 | JK Tammeka | - | JK Narva Trans | 0:2 | ||||
| 14. Round | 02/06/2024 | JK Narva Trans | - | JK Nõmme Kalju | 4:1 | ||||
| 15. Round | 15/06/2024 | Pärnu JK Vaprus | - | JK Narva Trans | 1:4 | ||||
| 16. Round | 19/06/2024 | JK Narva Trans | - | FC Kuressaare | 0:1 | ||||
| 33. Round | 23/10/2024 | JK Tallinna Kalev | - | JK Narva Trans | 0:1 | ||||
| 34. Round | 27/10/2024 | JK Narva Trans | - | Pärnu JK Vaprus | 1:1 | ||||
| 35. Round | 03/11/2024 | JK Tammeka | - | JK Narva Trans | 3:3 | ||||
| 36. Round | 09/11/2024 | JK Narva Trans | - | FC Kuressaare | 0:2 |
Estonia