| 27. Round | 06/03/2010 | Kickers Offenbach | - | Werder Bremen II | 4:0 | ||||
| 22. Round | 10/03/2010 | Borussia Dortmund II | - | Werder Bremen II | 1:2 | ||||
| 28. Round | 13/03/2010 | Werder Bremen II | - | FC Ingolstadt 04 | 0:0 | ||||
| 21. Round | 16/03/2010 | Werder Bremen II | - | VfL Osnabrück | 0:1 | ||||
| 29. Round | 21/03/2010 | SpVgg Unterhaching | - | Werder Bremen II | 0:1 |  |
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| 24. Round | 24/03/2010 | Wacker Burghausen | - | Werder Bremen II | 1:1 | |
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| 30. Round | 28/03/2010 | Werder Bremen II | - | FC Carl Zeiss Jena | 1:2 |  |
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| 25. Round | 07/04/2010 | Werder Bremen II | - | Eintracht Braunschweig | 0:3 | |
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| 35. Round | 17/04/2010 | SV Wehen Wiesbaden | - | Werder Bremen II | 2:0 | ||||
| 26. Round | 20/04/2010 | Werder Bremen II | - | Jahn Regensburg | 4:1 |  |
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| 36. Round | 24/04/2010 | Werder Bremen II | - | SV Sandhausen | 3:0 | ||||
| 37. Round | 30/04/2010 | Bayern München II | - | Werder Bremen II | 2:1 | ||||
| 38. Round | 08/05/2010 | Werder Bremen II | - | Erzgebirge Aue | 2:1 |
Hungary