| 1. Round | 13/07/2013 | SV Seligenporten | - | FC Augsburg II | 1:1 | ||||
| 2. Round | 16/07/2013 | FC Augsburg II | - | FV Illertissen | 1:4 | ||||
| 17. Round | 06/10/2013 | FC Augsburg II | - | 1. FC Schweinfurt 05 | 3:0 | ||||
| 22. Round | 08/11/2013 | FC Augsburg II | - | FC Memmingen | 4:0 | ||||
| 27. Round | 15/03/2014 | FC Augsburg II | - | TSV 1860 München II | 0:1 | ||||
| 34. Round | 29/04/2014 | Eintracht Bamberg | - | FC Augsburg II | 5:1 | ||||
| 35. Round | 03/05/2014 | FC Augsburg II | - | SpVgg Bayern Hof | 4:1 | ||||
| 37. Round | 16/05/2014 | FC Augsburg II | - | Bayern München II | 2:0 |  |
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| 38. Round | 21/05/2014 | TSV 1896 Rain | - | FC Augsburg II | 1:0 |
Austria