| 1. Round | 15/07/2012 | ND Mura 05 | - | Rudar Velenje | 1:1 |  |
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| 2. Round | 22/07/2012 | ND Gorica | - | ND Mura 05 | 3:1 | ||||
| 4. Round | 05/08/2012 | ND Mura 05 | - | Olimpija Ljubljana | 1:2 | ||||
| 5. Round | 12/08/2012 | NK Celje | - | ND Mura 05 | 1:0 | ||||
| 6. Round | 19/08/2012 | ND Mura 05 | - | NK Aluminij | 1:3 | |
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| 7. Round | 26/08/2012 | FC Koper | - | ND Mura 05 | 4:1 | ||||
| 8. Round | 02/09/2012 | ND Mura 05 | - | NK Triglav | 2:1 | ||||
| 9. Round | 16/09/2012 | NK Domžale | - | ND Mura 05 | 0:2 | |
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| 10. Round | 22/09/2012 | Rudar Velenje | - | ND Mura 05 | 2:1 | ||||
| 11. Round | 26/09/2012 | ND Mura 05 | - | ND Gorica | 3:1 | ||||
| 12. Round | 30/09/2012 | NK Maribor | - | ND Mura 05 | 1:0 |  |
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| 13. Round | 06/10/2012 | Olimpija Ljubljana | - | ND Mura 05 | 3:1 | ||||
| 14. Round | 21/10/2012 | ND Mura 05 | - | NK Celje | 2:2 | ||||
| 16. Round | 04/11/2012 | ND Mura 05 | - | FC Koper | 2:3 | ||||
| 17. Round | 07/11/2012 | NK Triglav | - | ND Mura 05 | 3:1 | ||||
| 18. Round | 11/11/2012 | ND Mura 05 | - | NK Domžale | 1:2 | |
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| 19. Round | 18/11/2012 | ND Mura 05 | - | Rudar Velenje | 4:0 | |
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| 15. Round | 21/11/2012 | NK Aluminij | - | ND Mura 05 | 0:2 | |
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| 20. Round | 24/11/2012 | ND Gorica | - | ND Mura 05 | 2:0 | ||||
| 21. Round | 02/12/2012 | ND Mura 05 | - | NK Maribor | 1:2 | |
Croatia