| 1. Round | 28/02/2025 | FCI Levadia | - | Harju JK | 5:0 | ||||
| 2. Round | 08/03/2025 | JK Tammeka | - | FCI Levadia | 2:3 | ||||
| 3. Round | 15/03/2025 | Pärnu JK Vaprus | - | FCI Levadia | 1:2 | ||||
| 4. Round | 30/03/2025 | FCI Levadia | - | JK Nõmme Kalju | 2:1 | ||||
| 5. Round | 05/04/2025 | JK Narva Trans | - | FCI Levadia | 0:1 | ||||
| 6. Round | 08/04/2025 | FCI Levadia | - | FC Kuressaare | 2:1 | ||||
| 7. Round | 12/04/2025 | FCI Levadia | - | FC Flora | 0:0 |  |
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| 8. Round | 19/04/2025 | JK Tallinna Kalev | - | FCI Levadia | 0:9 | ||||
| 9. Round | 23/04/2025 | Paide Linnameeskond | - | FCI Levadia | 2:1 | ||||
| 10. Round | 26/04/2025 | FCI Levadia | - | JK Tammeka | 4:0 | ||||
| 11. Round | 04/05/2025 | JK Nõmme Kalju | - | FCI Levadia | 2:0 | ||||
| 12. Round | 11/05/2025 | FCI Levadia | - | Paide Linnameeskond | 2:1 | ||||
| 13. Round | 18/05/2025 | FC Flora | - | FCI Levadia | 1:0 |
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