| 1. Round | 19/06/1999 | Lokomotiv-96 Vitebsk | - | NK Varteks | 1:2 | ||||
| 1. Round | 26/06/1999 | NK Varteks | - | Lokomotiv-96 Vitebsk | 2:2 | ||||
| 2. Round | 03/07/1999 | SK Brann | - | NK Varteks | 3:0 |  |
|||
| 2. Round | 10/07/1999 | NK Varteks | - | SK Brann | 5:4 pso | ||||
| 3. Round | 17/07/1999 | NK Varteks | - | Rostselmash Rostov | 1:2 | ||||
| 3. Round | 24/07/1999 | Rostselmash Rostov | - | NK Varteks | 0:1 |
Croatia