| A Lyga | 19/09/15 | FK Trakai | - | FK Atlantas | 5:1 | ||||
| A Lyga | 20/03/16 | FK Jonava | - | FK Atlantas | 0:1 | ||||
| A Lyga | 21/04/16 | FC Stumbras | - | FK Atlantas | 2:3 | ||||
| A Lyga | 12/07/16 | FK Atlantas | - | Utenis Utena | 2:0 | ||||
| A Lyga | 26/11/16 | FC Stumbras | - | FK Atlantas | 1:1 | ||||
| A Lyga | 04/04/17 | FK Atlantas | - | FK Trakai | 1:1 |  |
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| A Lyga | 10/05/17 | FK Trakai | - | FK Atlantas | 4:1 | |
Russia