| 1. Round | 19/08/1988 | BV Veendam | - | PEC Zwolle '82 | 1:2 | ||||
| 2. Round | 23/08/1988 | PEC Zwolle '82 | - | Willem II | 3:2 | ||||
| 4. Round | 30/08/1988 | Fortuna Sittard | - | PEC Zwolle '82 | 1:0 | ||||
| 5. Round | 03/09/1988 | Sparta Rotterdam | - | PEC Zwolle '82 | 3:1 | ||||
| 6. Round | 16/09/1988 | PEC Zwolle '82 | - | FC Twente | 2:2 | ||||
| 9. Round | 12/10/1988 | PSV Eindhoven | - | PEC Zwolle '82 | 2:0 | ||||
| 10. Round | 21/10/1988 | PEC Zwolle '82 | - | SBV Haarlem | 1:2 | ||||
| 11. Round | 29/10/1988 | FC Groningen | - | PEC Zwolle '82 | 3:0 | ||||
| 12. Round | 03/11/1988 | PEC Zwolle '82 | - | FC Utrecht | 2:1 | ||||
| 13. Round | 11/11/1988 | MVV | - | PEC Zwolle '82 | 4:2 | ||||
| 17. Round | 17/12/1988 | BVV Den Bosch | - | PEC Zwolle '82 | 4:0 | ||||
| 22. Round | 23/02/1989 | PEC Zwolle '82 | - | Sparta Rotterdam | 1:1 | ||||
| 25. Round | 18/03/1989 | RKC Waalwijk | - | PEC Zwolle '82 | 1:1 | ||||
| 28. Round | 06/04/1989 | PEC Zwolle '82 | - | FC Groningen | 1:3 |  |
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| 31. Round | 06/05/1989 | Feyenoord | - | PEC Zwolle '82 | 1:1 | ||||
| 33. Round | 14/05/1989 | VVV | - | PEC Zwolle '82 | 6:2 | ||||
| 34. Round | 20/05/1989 | PEC Zwolle '82 | - | BVV Den Bosch | 2:3 |
Netherlands