| 5. Round | 26/08/2005 | Scunthorpe United | - | Southend United | 1:0 | ||||
| 6. Round | 29/08/2005 | Hartlepool United | - | Scunthorpe United | 3:3 | ||||
| 7. Round | 02/09/2005 | Huddersfield Town | - | Scunthorpe United | 1:4 | ||||
| 8. Round | 10/09/2005 | Scunthorpe United | - | Port Vale FC | 2:0 | ||||
| 9. Round | 17/09/2005 | Doncaster Rovers | - | Scunthorpe United | 3:1 | ||||
| 10. Round | 24/09/2005 | Scunthorpe United | - | Walsall FC | 1:3 |  |
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| 15. Round | 22/10/2005 | Swindon Town | - | Scunthorpe United | 1:1 | ||||
| 19. Round | 26/11/2005 | Scunthorpe United | - | Brentford FC | 1:3 | ||||
| 41. Round | 08/04/2006 | Scunthorpe United | - | AFC Bournemouth | 2:2 | ||||
| 42. Round | 14/04/2006 | Yeovil Town | - | Scunthorpe United | 0:1 | ||||
| 43. Round | 17/04/2006 | Scunthorpe United | - | Swindon Town | 1:2 | ||||
| 45. Round | 29/04/2006 | Scunthorpe United | - | Blackpool FC | 1:0 | ||||
| 46. Round | 06/05/2006 | Oldham Athletic | - | Scunthorpe United | 1:1 |
Ireland