| 1. Round | 29/07/2000 | NK Varteks | - | Slaven Belupo | 1:1 | ||||
| 2. Round | 05/08/2000 | NK Čakovec | - | NK Varteks | 2:2 | ||||
| 4. Round | 19/08/2000 | HNK Rijeka | - | NK Varteks | 2:2 | ||||
| 6. Round | 10/09/2000 | Hrvatski Dragovoljac | - | NK Varteks | 3:1 | ||||
| 9. Round | 30/09/2000 | Hajduk Split | - | NK Varteks | 2:0 | ||||
| 10. Round | 04/10/2000 | NK Varteks | - | NK Marsonia | 3:0 | ||||
| 11. Round | 15/10/2000 | NK Zagreb | - | NK Varteks | 4:2 |  |
|||
| 12. Round | 21/10/2000 | Slaven Belupo | - | NK Varteks | 7:1 | ||||
| 18. Round | 03/12/2000 | HNK Šibenik | - | NK Varteks | 1:1 | ||||
| 19. Round | 24/02/2001 | NK Osijek | - | NK Varteks | 4:1 | ||||
| 20. Round | 04/03/2001 | NK Varteks | - | Hajduk Split | 1:1 | ||||
| 21. Round | 11/03/2001 | NK Marsonia | - | NK Varteks | 1:1 | ||||
| 22. Round | 17/03/2001 | NK Varteks | - | NK Zagreb | 2:1 |  |
Slovenia