1. Round | 01/08/2016 | FK Krasnodar | - | FK Tom Tomsk | 3:0 | ||||
2. Round | 07/08/2016 | Lokomotiv Moskva | - | FK Tom Tomsk | 2:2 | ||||
3. Round | 14/08/2016 | FK Tom Tomsk | - | FK Ufa | 1:0 | ||||
4. Round | 20/08/2016 | FK Rostov | - | FK Tom Tomsk | 3:0 | ||||
5. Round | 27/08/2016 | FK Tom Tomsk | - | CSKA Moskva | 0:1 | ||||
6. Round | 10/09/2016 | FK Amkar Perm | - | FK Tom Tomsk | 1:0 | ||||
7. Round | 17/09/2016 | FK Tom Tomsk | - | Arsenal Tula | 1:0 | ||||
8. Round | 26/09/2016 | Rubin Kazan | - | FK Tom Tomsk | 2:1 | ||||
9. Round | 01/10/2016 | FK Tom Tomsk | - | FK Ural | 1:1 | ||||
11. Round | 22/10/2016 | FK Tom Tomsk | - | Anzhi Makhachkala | 0:3 | ||||
14. Round | 21/11/2016 | Terek Grozny | - | FK Tom Tomsk | 0:0 | ||||
15. Round | 27/11/2016 | Krylia Sovetov | - | FK Tom Tomsk | 3:0 |