| 19. Round | 24/01/2010 | Rot-Weiß Oberhausen | - | FC Augsburg | 0:3 | ||||
| 20. Round | 30/01/2010 | FC Augsburg | - | Arminia Bielefeld | 3:1 | ||||
| 21. Round | 06/02/2010 | 1. FC Union Berlin | - | FC Augsburg | 0:0 | ||||
| 22. Round | 14/02/2010 | FC Augsburg | - | Fortuna Düsseldorf | 2:0 | ||||
| 23. Round | 20/02/2010 | Hansa Rostock | - | FC Augsburg | 0:1 | ||||
| 24. Round | 27/02/2010 | TuS Koblenz | - | FC Augsburg | 0:1 |  |
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| 25. Round | 07/03/2010 | FC Augsburg | - | SC Paderborn 07 | 3:0 | ||||
| 26. Round | 13/03/2010 | Karlsruher SC | - | FC Augsburg | 1:0 | |
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| 27. Round | 20/03/2010 | FC Augsburg | - | Rot Weiss Ahlen | 3:1 |  |
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| 29. Round | 04/04/2010 | FC Augsburg | - | SpVgg Greuther Fürth | 1:1 | ||||
| 30. Round | 12/04/2010 | FC St. Pauli | - | FC Augsburg | 3:0 | ||||
| 31. Round | 16/04/2010 | FC Augsburg | - | MSV Duisburg | 2:0 | ||||
| 32. Round | 25/04/2010 | FSV Frankfurt | - | FC Augsburg | 1:1 |
Netherlands