| 2. Bundesliga | Matches | W | D | L |  |
 |
 |
| home | - | - | - | - | - | - | - |
| away | 1 | - | - | 1 | 1 | - | - |
| overall | 1 | - | - | 1 | 1 | - | - |
| DFB-Pokal | Matches | W | D | L | |
|
|
| home | 1 | 1 | - | - | 4 | - | - |
| away | - | - | - | - | - | - | - |
| overall | 1 | 1 | - | - | 4 | - | - |
| Regionalliga Nord | Matches | W | D | L | |
|
|
| home | 1 | - | - | 1 | 3 | - | - |
| away | 1 | 1 | - | - | 3 | 1 | - |
| overall | 2 | 1 | - | 1 | 6 | 1 | - |
| Regionalliga Nordost (1994-2000) | Matches | W | D | L | |
|
|
| home | 2 | 1 | - | 1 | 6 | - | - |
| away | - | - | - | - | - | - | - |
| overall | 2 | 1 | - | 1 | 6 | - | - |
| 2. Bundesliga | Home | - | Guest | |
|
|
Results |
| 01/10/06 | TSV 1860 München | - | FC Carl Zeiss Jena | 1 | - | - | 2:0 |
| DFB-Pokal | Home | - | Guest | |
|
|
Results |
| 29/08/98 | FC Carl Zeiss Jena | - | SSV Ulm 1846 | 4 | - | - | 1:0 |
| Regionalliga Nord | Home | - | Guest | |
|
|
Results |
| 28/03/06 | Holstein Kiel | - | FC Carl Zeiss Jena | 3 | 1 | - | 1:2 |
| 20/05/06 | FC Carl Zeiss Jena | - | Fortuna Düsseldorf | 3 | - | - | 2:3 |
| Regionalliga Nordost (1994-2000) | Home | - | Guest | |
|
|
Results |
| 27/03/99 | FC Carl Zeiss Jena | - | Rot-Weiß Erfurt | 3 | - | - | 0:1 |
| 05/02/00 | FC Carl Zeiss Jena | - | Hertha BSC II | 3 | - | - | 3:1 |
Germany