| Primera División | Matches | W | D | L |  |
 |
 |
| home | 5 | 3 | - | 2 | 6 | - | - |
| away | 8 | 2 | 2 | 4 | 21 | - | 1 |
| overall | 13 | 5 | 2 | 6 | 27 | - | 1 |
| Segunda División | Matches | W | D | L | |
|
|
| home | 1 | 1 | - | - | 5 | - | - |
| away | - | - | - | - | - | - | - |
| overall | 1 | 1 | - | - | 5 | - | - |
| Primera División | Home | - | Guest | |
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Results |
| 03/05/17 | Universidad Técnica | - | Cusco FC | 1 | - | - | 2:1 |
| 19/08/18 | Universitario de Deportes | - | Cusco FC | 1 | - | - | 0:1 |
| 09/03/19 | Cusco FC | - | FBC Melgar | 1 | - | - | 1:0 |
| 16/09/19 | Cusco FC | - | Sport Huancayo | - | - | - | 0:1 |
| 02/11/20 | Cusco FC | - | Sport Boys | 2 | - | - | 1:2 |
| 04/08/21 | FBC Melgar | - | Cusco FC | 2 | - | - | 2:2 |
| 06/03/23 | Cusco FC | - | Unión Comercio | 1 | - | - | 2:1 |
| 21/05/23 | Sporting Cristal | - | Cusco FC | 4 | - | - | 3:2 |
| 17/08/23 | Mannucci | - | Cusco FC | 1 | - | - | 0:0 |
| 27/08/23 | Deportivo Binacional | - | Cusco FC | 4 | - | 1 | 2:0 |
| 24/02/24 | Sport Boys | - | Cusco FC | 3 | - | - | 3:0 |
| 04/05/25 | Cusco FC | - | Universitario de Deportes | 2 | - | - | 2:0 |
| 24/05/25 | Comerciantes Unidos | - | Cusco FC | 5 | - | - | 1:2 |
| Segunda División | Home | - | Guest | |
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|
Results |
| 04/09/22 | Cusco FC | - | Unión Huaral | 5 | - | - | 2:0 |
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