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| 1st(1st leg) | MŠK Žilina | - | FK Dukla Banská Bystrica | 1:0 (0:0) | ||
| 2nd (2nd leg) | FK Dukla Banská Bystrica | - | MŠK Žilina | 0:0 (0:0) | ||
| 1st(1st leg): 17/04/2012 16:30 | 2nd (2nd leg): 24/04/2012 16:30 | Winner: MŠK Žilina | ||||
| 1st(1st leg) | Zlaté Moravce | - | FK Senica | 1:1 (0:0) | ||
| 2nd (2nd leg) | FK Senica | - | Zlaté Moravce | 3:0 (1:0) | ||
| 1st(1st leg): 17/04/2012 16:30 | 2nd (2nd leg): 24/04/2012 16:30 | Winner: FK Senica | ||||
