| Period | Manager | Country | born |
| 03/09/2024 - 30/06/2025 | David Oulehla |
|
26/09/1983 |
| 22/12/2022 - 02/09/2024 | Pavol Majerník |
|
31/12/1978 |
| 01/07/2022 - 15/12/2022 | Juraj Jarábek |
|
03/10/1962 |
| 01/07/2016 - 30/06/2017 | Jozef Kostelník |
|
14/09/1970 |
| 28/11/2015 - 30/06/2016 | Štefan Horný |
|
13/01/1957 |
| 01/07/2015 - 28/10/2015 | Aleš Křeček |
|
26/12/1971 |
![MFK Skalica [Youth]](https://s.hs-data.com/bilder/wappen/mini/42489.gif?fallback=png "MFK Skalica [Youth]"){kind=small}
![MFK Skalica [Youth B]](https://s.hs-data.com/bilder/wappen/mini/42490.gif?fallback=png "MFK Skalica [Youth B]"){kind=small}
![MFK Skalica [Youth C]](https://s.hs-data.com/bilder/wappen/mini/42491.gif?fallback=png "MFK Skalica [Youth C]"){kind=small}