| Period | Manager | Country | born |
| 09/10/2023 - 15/03/2024 | Rajko Vidović |
|
04/03/1975 |
| 10/03/2023 - 30/06/2023 | Samir Toplak |
|
23/04/1970 |
| 06/10/2022 - 09/03/2023 | Petra Mandic |
|
22/10/1985 |
| 04/08/2022 - 05/10/2022 | Ilija Lončarević |
|
08/10/1944 |
| 01/07/2022 - 25/07/2022 | Dinko Jeličić |
|
19/09/1973 |
| 18/10/2021 - 30/06/2022 | Roy Ferenčina |
|
04/06/1970 |
| 01/07/2021 - 17/10/2021 | Igor Tolić |
|
25/09/1977 |
| 20/09/2019 - 30/06/2021 | Ivica Landeka |
|
05/08/1979 |
| 31/01/2019 - 19/09/2019 | Ante Ivanda |
|
14/10/1973 |
| 19/04/2018 - 31/12/2018 | Denis Bezer |
|
27/03/1975 |
| 04/01/2018 - 17/04/2018 | Nino Bule |
|
19/03/1976 |
| 09/08/2017 - 05/12/2017 | Denis Bezer |
|
27/03/1975 |
![NK Kustošija [Youth]](https://s.hs-data.com/bilder/wappen/mini/54563.gif?fallback=png "NK Kustošija [Youth]"){kind=small}
![NK Kustošija [Youth B]](https://s.hs-data.com/bilder/wappen/mini/54566.gif?fallback=png "NK Kustošija [Youth B]"){kind=small}
![NK Kustošija [Youth C]](https://s.hs-data.com/bilder/wappen/mini/54569.gif?fallback=png "NK Kustošija [Youth C]"){kind=small}