| Period | Manager | Country | born |
| 01/07/2024 - 30/06/2025 | Aykhan Abbasov |
|
25/08/1981 |
| 01/07/2022 - 30/06/2024 | Vugar Asgarli |
|
26/06/1984 |
| 25/01/2021 - 30/06/2022 | Senan Qurbanov |
|
04/08/1980 |
| 16/08/2020 - 24/01/2021 | Yunis Hüseynov |
|
01/02/1965 |
| 01/07/2018 - 07/08/2020 | Tarlan Ahmadov |
|
17/11/1971 |
| 01/07/2018 - 30/06/2019 | Mladen Milinković |
|
14/05/1968 |
| 18/12/2017 - 30/06/2018 | Yuriy Maksimov |
|
08/12/1968 |
| 01/07/2015 - 17/12/2017 | Zaur Svanadze |
|
23/01/1958 |
| 01/07/2009 - 30/06/2015 | Kakhaber Tskhadadze |
|
07/09/1968 |
| 01/05/2006 - 30/06/2009 | Valentin Khodukin |
|
17/08/1939 |
| 01/07/2004 - 30/06/2006 | Anatoliy Konkov |
|
19/09/1949 |
| 01/06/2004 - 30/06/2005 | Boyukaga Agaev |
|
![Şamaxı FK [Youth]](https://s.hs-data.com/bilder/wappen/mini/24163.gif?fallback=png "Şamaxı FK [Youth]"){kind=small}
![Şamaxı FK [Youth B]](https://s.hs-data.com/bilder/wappen/mini/62237.gif?fallback=png "Şamaxı FK [Youth B]"){kind=small}
![Şamaxı FK [Youth C]](https://s.hs-data.com/bilder/wappen/mini/62240.gif?fallback=png "Şamaxı FK [Youth C]"){kind=small}