| 1. Round | 10/08/2024 | 1. FC Slovácko [Youth] | - | FK Mladá Boleslav [Youth] | 4:2 | ||||
| 2. Round | 17/08/2024 | FK Pardubice [Youth] | - | 1. FC Slovácko [Youth] | 1:1 |  |
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| 3. Round | 24/08/2024 | 1. FC Slovácko [Youth] | - | Slavia Praha [Youth] | 1:2 | ||||
| 4. Round | 29/08/2024 | FK Jablonec [Youth] | - | 1. FC Slovácko [Youth] | 2:2 | ||||
| 5. Round | 07/09/2024 | 1. FC Slovácko [Youth] | - | Slovan Liberec [Youth] | 0:0 | ||||
| 7. Round | 21/09/2024 | 1. FC Slovácko [Youth] | - | AC Sparta Praha [Youth] | 1:2 | |
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| 6. Round | 24/09/2024 | SFC Opava [Youth] | - | 1. FC Slovácko [Youth] | 2:3 | ||||
| 8. Round | 28/09/2024 | 1. FC Slovácko [Youth] | - | FC Zlín [Youth] | 2:2 |  |
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| 16. Round | 08/03/2025 | FK Mladá Boleslav [Youth] | - | 1. FC Slovácko [Youth] | 5:0 | ||||
| 17. Round | 14/03/2025 | 1. FC Slovácko [Youth] | - | FK Pardubice [Youth] | 2:2 | ||||
| 21. Round | 12/04/2025 | 1. FC Slovácko [Youth] | - | SFC Opava [Youth] | 2:2 | ||||
| 22. Round | 18/04/2025 | AC Sparta Praha [Youth] | - | 1. FC Slovácko [Youth] | 2:0 | ||||
| 23. Round | 26/04/2025 | FC Zlín [Youth] | - | 1. FC Slovácko [Youth] | 1:0 | |
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| 24. Round | 03/05/2025 | 1. FC Slovácko [Youth] | - | Sigma Olomouc [Youth] | 3:0 | |
Nigeria