| 7. Round | 21/09/2024 | FK Dukla Praha [Youth] | - | FK Mladá Boleslav [Youth] | 1:0 |  |
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| 15. Round | 16/11/2024 | FK Mladá Boleslav [Youth] | - | SFC Opava [Youth] | 2:1 |  |
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| 10. Round | 23/11/2024 | AC Sparta Praha [Youth] | - | FK Mladá Boleslav [Youth] | 6:2 | ||||
| 16. Round | 08/03/2025 | FK Mladá Boleslav [Youth] | - | 1. FC Slovácko [Youth] | 5:0 | ||||
| 17. Round | 14/03/2025 | FC Zlín [Youth] | - | FK Mladá Boleslav [Youth] | 7:2 | ||||
| 18. Round | 22/03/2025 | FK Mladá Boleslav [Youth] | - | Sigma Olomouc [Youth] | 0:2 | ||||
| 22. Round | 18/04/2025 | FK Mladá Boleslav [Youth] | - | FK Dukla Praha [Youth] | 2:2 | ||||
| 28. Round | 31/05/2025 | FK Jablonec [Youth] | - | FK Mladá Boleslav [Youth] | 2:3 | ||||
| 29. Round | 07/06/2025 | FK Mladá Boleslav [Youth] | - | Slovan Liberec [Youth] | 1:4 | ||||
| 30. Round | 12/06/2025 | SFC Opava [Youth] | - | FK Mladá Boleslav [Youth] | 3:1 |
Czech Republic