| 2. Round | 01/09/2012 | Skoda Xanthi | - | AEK Athen | 1:0 | ||||
| 4. Round | 22/09/2012 | Skoda Xanthi | - | PAOK Saloniki | 0:3 | ||||
| 7. Round | 20/10/2012 | Olympiakos Piraeus | - | Skoda Xanthi | 4:0 | ||||
| 8. Round | 28/10/2012 | Veria FC | - | Skoda Xanthi | 0:0 |  |
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| 9. Round | 04/11/2012 | Skoda Xanthi | - | Levadiakos | 1:0 | |
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| 10. Round | 10/11/2012 | PAS Giannina | - | Skoda Xanthi | 1:0 |
Brazil