| 17. Round | 24/10/2020 | FK Krasnodar 2 | - | Dinamo Bryansk | 0:0 | ||||
| 18. Round | 28/10/2020 | FK Neftekhimik | - | FK Krasnodar 2 | 5:0 | ||||
| 19. Round | 01/11/2020 | FK Krasnodar 2 | - | Alania Vladikavkaz | 0:4 | ||||
| 20. Round | 07/11/2020 | Tekstilshchik Ivanovo | - | FK Krasnodar 2 | 0:0 | ||||
| 23. Round | 20/11/2020 | FK Krasnodar 2 | - | Shinnik Yaroslavl | 1:2 | ||||
| 25. Round | 29/11/2020 | FK Krasnodar 2 | - | Akron Tolyatti | 1:1 | ||||
| 26. Round | 05/12/2020 | FK Krasnodar 2 | - | Spartak Moskva 2 | 7:0 | ||||
| 28. Round | 06/03/2021 | FK Krasnodar 2 | - | Veles Moskva | 2:1 | ||||
| 29. Round | 10/03/2021 | SKA-Khabarovsk | - | FK Krasnodar 2 | 0:0 | ||||
| 30. Round | 14/03/2021 | FK Krasnodar 2 | - | FK Chayka | 1:1 |  |
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| 33. Round | 28/03/2021 | FK Nizhny Novgorod | - | FK Krasnodar 2 | 3:0 | ||||
| 38. Round | 24/04/2021 | FK Krasnodar 2 | - | FK Neftekhimik | 1:1 | ||||
| 39. Round | 28/04/2021 | Alania Vladikavkaz | - | FK Krasnodar 2 | 3:1 | ||||
| 41. Round | 08/05/2021 | Krylia Sovetov | - | FK Krasnodar 2 | 6:0 | ||||
| 42. Round | 15/05/2021 | FK Krasnodar 2 | - | Volgar Astrakhan | 1:0 |
Russia