| 1. Round | 28/09/2006 | Bayer Leverkusen | - | FC Sion | 3:1 |  |
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| Group B | 19/10/2006 | Club Brugge KV | - | Bayer Leverkusen | 1:1 | ||||
| Group B | 23/11/2006 | Bayer Leverkusen | - | Tottenham Hotspur | 0:1 | ||||
| Group B | 29/11/2006 | Dinamo Bucureşti | - | Bayer Leverkusen | 2:1 | ||||
| Group B | 14/12/2006 | Bayer Leverkusen | - | Beşiktaş | 2:1 | ||||
| 3. Round | 14/02/2007 | Bayer Leverkusen | - | Blackburn Rovers | 3:2 | ||||
| 3. Round | 22/02/2007 | Blackburn Rovers | - | Bayer Leverkusen | 0:0 | ||||
| Round of 16 | 08/03/2007 | RC Lens | - | Bayer Leverkusen | 2:1 | ||||
| Round of 16 | 14/03/2007 | Bayer Leverkusen | - | RC Lens | 3:0 | |
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| Quarter-finals | 05/04/2007 | Bayer Leverkusen | - | CA Osasuna | 0:3 |
Ukraine