| 6. Round | 14/09/2024 | Slavia Praha [Youth] | - | FC Zbrojovka Brno [Youth] | 2:3 |  |
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| 10. Round | 12/10/2024 | 1. FC Slovácko [Youth] | - | FC Zbrojovka Brno [Youth] | 2:1 | |
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| 15. Round | 16/11/2024 | Dynamo České Budějovice [Youth] | - | FC Zbrojovka Brno [Youth] | 3:1 | |
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| 17. Round | 14/03/2025 | FC Zbrojovka Brno [Youth] | - | Viktoria Plzeň [Youth] | 1:4 | ||||
| 18. Round | 22/03/2025 | Vysočina Jihlava [Youth] | - | FC Zbrojovka Brno [Youth] | 2:1 | ||||
| 19. Round | 28/03/2025 | FC Zbrojovka Brno [Youth] | - | FK Mladá Boleslav [Youth] | 1:1 | |
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| 21. Round | 12/04/2025 | FC Zbrojovka Brno [Youth] | - | Slavia Praha [Youth] | 0:3 | ||||
| 22. Round | 17/04/2025 | FK Jablonec [Youth] | - | FC Zbrojovka Brno [Youth] | 0:2 | |
Czech Republic