| 22. Round | 18/04/2025 | SFC Opava [Youth] | - | FC Zlín [Youth] | 0:1 | ||||
| 23. Round | 26/04/2025 | FC Zlín [Youth] | - | 1. FC Slovácko [Youth] | 1:0 | ||||
| 28. Round | 31/05/2025 | FC Zlín [Youth] | - | Dynamo České Budějovice [Youth] | 2:2 | ||||
| 29. Round | 06/06/2025 | FK Dukla Praha [Youth] | - | FC Zlín [Youth] | 0:2 | ||||
| 30. Round | 11/06/2025 | FC Zlín [Youth] | - | Viktoria Plzeň [Youth] | 1:0 |
Czech Republic