| 5. Round | 02/10/2024 | FC Zbrojovka Brno [Youth] | - | FK Pardubice [Youth] | 1:1 |  |
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| 9. Round | 05/10/2024 | Viktoria Plzeň [Youth] | - | FK Pardubice [Youth] | 3:4 | |
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| 10. Round | 12/10/2024 | FK Pardubice [Youth] | - | Vysočina Jihlava [Youth] | 5:1 | ||||
| 11. Round | 19/10/2024 | FK Mladá Boleslav [Youth] | - | FK Pardubice [Youth] | 3:1 | ||||
| 6. Round | 06/11/2024 | FK Pardubice [Youth] | - | Banik Ostrava [Youth] | 1:1 |  |
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| 14. Round | 09/11/2024 | FK Jablonec [Youth] | - | FK Pardubice [Youth] | 1:4 | ||||
| 15. Round | 16/11/2024 | FK Pardubice [Youth] | - | Slovan Liberec [Youth] | 0:1 | ||||
| 16. Round | 08/03/2025 | FK Pardubice [Youth] | - | SFC Opava [Youth] | 0:2 | ||||
| 17. Round | 14/03/2025 | 1. FC Slovácko [Youth] | - | FK Pardubice [Youth] | 2:2 | ||||
| 18. Round | 22/03/2025 | FK Pardubice [Youth] | - | FC Zlín [Youth] | 2:1 | |
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| 20. Round | 05/04/2025 | FK Pardubice [Youth] | - | FC Zbrojovka Brno [Youth] | 2:1 | ||||
| 22. Round | 18/04/2025 | FK Pardubice [Youth] | - | Dynamo České Budějovice [Youth] | 5:2 | |
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| 27. Round | 24/05/2025 | FK Pardubice [Youth] | - | AC Sparta Praha [Youth] | 1:2 |
USA