| 3. Round | 19/09/2009 | Málaga CF | - | Racing Santander | 1:2 | ||||
| 4. Round | 23/09/2009 | Espanyol Barcelona | - | Málaga CF | 2:1 |  |
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| 6. Round | 04/10/2009 | Xerez CD | - | Málaga CF | 1:1 | |
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| 7. Round | 18/10/2009 | Málaga CF | - | UD Almería | 1:2 |  |
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| 9. Round | 01/11/2009 | Málaga CF | - | Valencia CF | 0:1 | ||||
| 10. Round | 07/11/2009 | CD Tenerife | - | Málaga CF | 2:2 | |
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| 12. Round | 28/11/2009 | Sevilla FC | - | Málaga CF | 2:2 | ||||
| 13. Round | 06/12/2009 | Málaga CF | - | CA Osasuna | 1:1 | ||||
| 14. Round | 13/12/2009 | Real Valladolid | - | Málaga CF | 1:1 | ||||
| 17. Round | 10/01/2010 | Málaga CF | - | Athletic Club | 1:1 |
Portugal