| 16. Round | 15/02/2025 | FC Collina d'Oro | - | FC St. Gallen II | 0:1 | ||||
| 17. Round | 22/02/2025 | FC St. Gallen II | - | SV Höngg | 1:2 | ||||
| 18. Round | 01/03/2025 | FC Tuggen | - | FC St. Gallen II | 0:2 |  |
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| 19. Round | 08/03/2025 | FC St. Gallen II | - | FC Mendrisio | 3:0 | ||||
| 20. Round | 12/03/2025 | SC YF/Juventus Zürich | - | FC St. Gallen II | 1:4 |  |
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| 21. Round | 23/03/2025 | FC St. Gallen II | - | FC Wettswil-Bonstetten | 4:1 | |
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| 23. Round | 05/04/2025 | FC St. Gallen II | - | AC Taverne | 0:1 | ||||
| 25. Round | 19/04/2025 | FC St. Gallen II | - | FC Linth 04 | 3:0 | ||||
| 26. Round | 26/04/2025 | FC Winterthur II | - | FC St. Gallen II | 1:3 | |
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| 27. Round | 03/05/2025 | FC St. Gallen II | - | FC Kosova Zürich | 1:0 | ||||
| 28. Round | 10/05/2025 | FC Freienbach | - | FC St. Gallen II | 1:1 | ||||
| 29. Round | 17/05/2025 | FC St. Gallen II | - | FC Uzwil | 1:1 | ||||
| 30. Round | 24/05/2025 | SV Schaffhausen | - | FC St. Gallen II | 1:1 |
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