| 1. Round | 08/08/2016 | VfB Stuttgart | - | FC St. Pauli | 2:1 |  |
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| 2. Round | 12/08/2016 | Fortuna Düsseldorf | - | VfB Stuttgart | 1:0 | ||||
| 5. Round | 17/09/2016 | 1. FC Kaiserslautern | - | VfB Stuttgart | 0:1 | ||||
| 6. Round | 20/09/2016 | VfB Stuttgart | - | Eintracht Braunschweig | 2:0 | ||||
| 7. Round | 23/09/2016 | VfL Bochum | - | VfB Stuttgart | 1:1 | |
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| 8. Round | 03/10/2016 | VfB Stuttgart | - | SpVgg Greuther Fürth | 4:0 | ||||
| 9. Round | 15/10/2016 | Dynamo Dresden | - | VfB Stuttgart | 5:0 | ||||
| 14. Round | 28/11/2016 | VfB Stuttgart | - | 1. FC Nürnberg | 3:1 | ||||
| 15. Round | 04/12/2016 | Erzgebirge Aue | - | VfB Stuttgart | 0:4 | ||||
| 17. Round | 18/12/2016 | Würzburger Kickers | - | VfB Stuttgart | 3:0 |
Japan